Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AC005962.1-201ENST00000584100 773 ntBASIC13.69□□□□□ -0.22
TRA2BP62995 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.69□□□□□ -0.22
TRA2BP62995 AC005324.6-201ENST00000587972 613 ntBASIC13.69□□□□□ -0.22
TRA2BP62995 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 BAP1-211ENST00000615113 489 ntBASIC13.69□□□□□ -0.22
TRA2BP62995 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.69□□□□□ -0.22
TRA2BP62995 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
TRA2BP62995 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.69□□□□□ -0.22
TRA2BP62995 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TRA2BP62995 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.68□□□□□ -0.22
TRA2BP62995 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.68□□□□□ -0.22
TRA2BP62995 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRA2BP62995 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.68□□□□□ -0.22
TRA2BP62995 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.68□□□□□ -0.22
TRA2BP62995 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRA2BP62995 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.68□□□□□ -0.22
TRA2BP62995 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.68□□□□□ -0.22
TRA2BP62995 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.68□□□□□ -0.22
TRA2BP62995 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 KRT8P29-201ENST00000420409 1371 ntBASIC13.68□□□□□ -0.22
TRA2BP62995 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRA2BP62995 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.68□□□□□ -0.22
TRA2BP62995 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.67□□□□□ -0.22
TRA2BP62995 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRA2BP62995 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TRA2BP62995 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 MIR658-201ENST00000385210 100 ntBASIC13.67□□□□□ -0.22
TRA2BP62995 MIR663B-201ENST00000408361 115 ntBASIC13.67□□□□□ -0.22
TRA2BP62995 BTBD6P1-201ENST00000412176 1267 ntBASIC13.67□□□□□ -0.22
TRA2BP62995 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.67□□□□□ -0.22
TRA2BP62995 RPSAP36-202ENST00000494591 1261 ntBASIC13.67□□□□□ -0.22
TRA2BP62995 IGHV3-71-201ENST00000523324 359 ntBASIC13.67□□□□□ -0.22
TRA2BP62995 PGAM1P5-201ENST00000548011 764 ntBASIC13.67□□□□□ -0.22
TRA2BP62995 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
TRA2BP62995 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRA2BP62995 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms