Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D3P61077 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D3P61077 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D3P61077 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBE2D3P61077 AP001972.5-201ENST00000624624 2338 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 AC092183.1-201ENST00000469884 875 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 ELK1P1-201ENST00000485699 580 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC10.42□□□□□ -0.74
UBE2D3P61077 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 VPS18-202ENST00000558474 873 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D3P61077 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 AC009486.1-201ENST00000569860 813 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC10.42□□□□□ -0.74
UBE2D3P61077 CHCHD2P3-201ENST00000603038 451 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 CU634019.7-201ENST00000624153 1185 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 FP236241.2-201ENST00000624906 1185 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 AC015688.4-201ENST00000580780 1647 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 AC106818.1-201ENST00000623223 3242 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.42□□□□□ -0.74
UBE2D3P61077 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
UBE2D3P61077 AC020910.6-201ENST00000623084 1459 ntBASIC10.42□□□□□ -0.74
UBE2D3P61077 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBE2D3P61077 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC10.42□□□□□ -0.74
UBE2D3P61077 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC10.41□□□□□ -0.74
UBE2D3P61077 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.41□□□□□ -0.74
UBE2D3P61077 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBE2D3P61077 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms