Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL358472.3-201ENST00000608147 415 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.4□□□□□ -0.26
CLDN20P56880 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLDN20P56880 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.4□□□□□ -0.26
CLDN20P56880 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CLDN20P56880 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.39□□□□□ -0.27
CLDN20P56880 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.39□□□□□ -0.27
CLDN20P56880 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.39□□□□□ -0.27
CLDN20P56880 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.39□□□□□ -0.27
CLDN20P56880 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 MIR4538-201ENST00000581377 78 ntBASIC13.39□□□□□ -0.27
CLDN20P56880 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.39□□□□□ -0.27
CLDN20P56880 AC091271.1-201ENST00000611877 1162 ntBASIC13.39□□□□□ -0.27
CLDN20P56880 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 AC130686.1-201ENST00000622936 2466 ntBASIC13.39□□□□□ -0.27
CLDN20P56880 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CLDN20P56880 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.39□□□□□ -0.27
CLDN20P56880 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.39□□□□□ -0.27
CLDN20P56880 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CLDN20P56880 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.38□□□□□ -0.27
CLDN20P56880 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CLDN20P56880 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CLDN20P56880 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CLDN20P56880 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 Z82170.1-201ENST00000625081 3192 ntBASIC13.38□□□□□ -0.27
CLDN20P56880 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.38□□□□□ -0.27
CLDN20P56880 BTBD6P1-201ENST00000412176 1267 ntBASIC13.38□□□□□ -0.27
CLDN20P56880 AC079178.1-201ENST00000420915 656 ntBASIC13.38□□□□□ -0.27
CLDN20P56880 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CLDN20P56880 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms