Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDN6P56747 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC13.91□□□□□ -0.18
CLDN6P56747 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.91□□□□□ -0.18
CLDN6P56747 AC012073.1-201ENST00000606114 1108 ntBASIC13.91□□□□□ -0.18
CLDN6P56747 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.91□□□□□ -0.18
CLDN6P56747 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
CLDN6P56747 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 LINC02228-204ENST00000642115 2962 ntBASIC13.91□□□□□ -0.18
CLDN6P56747 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLDN6P56747 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.91□□□□□ -0.18
CLDN6P56747 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLDN6P56747 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLDN6P56747 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLDN6P56747 AC138035.3-201ENST00000622706 2791 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN6P56747 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
CLDN6P56747 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLDN6P56747 MYO15B-237ENST00000642007 4893 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CLDN6P56747 NHP2-202ENST00000314397 599 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 AC073869.2-201ENST00000417338 1026 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN6P56747 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 AC092638.2-201ENST00000441105 947 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN6P56747 AC024293.1-201ENST00000467930 498 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.9□□□□□ -0.18
CLDN6P56747 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
CLDN6P56747 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 AC138701.2-201ENST00000553634 226 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.9□□□□□ -0.18
CLDN6P56747 AC007952.4-201ENST00000573866 637 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 RN7SL596P-201ENST00000582123 288 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 AP003392.6-201ENST00000607709 325 ntBASIC13.9□□□□□ -0.18
CLDN6P56747 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.9□□□□□ -0.18
CLDN6P56747 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLDN6P56747 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CLDN6P56747 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLDN6P56747 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.9□□□□□ -0.19
CLDN6P56747 AHCYP4-201ENST00000419201 1315 ntBASIC13.9□□□□□ -0.19
CLDN6P56747 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLDN6P56747 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN6P56747 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.89□□□□□ -0.19
CLDN6P56747 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CLDN6P56747 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLDN6P56747 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.89□□□□□ -0.19
CLDN6P56747 GUSBP10-201ENST00000417412 665 ntBASIC13.89□□□□□ -0.19
CLDN6P56747 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.89□□□□□ -0.19
CLDN6P56747 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms