Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.98□□□□□ -0.01
ATXN3P54252 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATXN3P54252 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.98□□□□□ -0.01
ATXN3P54252 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
ATXN3P54252 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.98□□□□□ -0.01
ATXN3P54252 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATXN3P54252 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATXN3P54252 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.98□□□□□ -0.01
ATXN3P54252 PRSS30P-206ENST00000641773 873 ntBASIC14.98□□□□□ -0.01
ATXN3P54252 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATXN3P54252 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ATXN3P54252 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ATXN3P54252 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.98□□□□□ -0.01
ATXN3P54252 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATXN3P54252 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ATXN3P54252 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ATXN3P54252 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.97□□□□□ -0.01
ATXN3P54252 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ATXN3P54252 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 AL928921.2-201ENST00000641325 2442 ntBASIC14.97□□□□□ -0.01
ATXN3P54252 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.97□□□□□ -0.01
ATXN3P54252 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ATXN3P54252 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 MTHFR-210ENST00000641407 2387 ntBASIC14.97□□□□□ -0.01
ATXN3P54252 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.97□□□□□ -0.01
ATXN3P54252 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.97□□□□□ -0.01
ATXN3P54252 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.97□□□□□ -0.01
ATXN3P54252 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.97□□□□□ -0.01
ATXN3P54252 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.97□□□□□ -0.01
ATXN3P54252 AL596276.2-201ENST00000447525 331 ntBASIC14.97□□□□□ -0.01
ATXN3P54252 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.97□□□□□ -0.01
ATXN3P54252 NUP210P1-202ENST00000504322 710 ntBASIC14.97□□□□□ -0.01
ATXN3P54252 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.97□□□□□ -0.01
ATXN3P54252 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.97□□□□□ -0.01
ATXN3P54252 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.97□□□□□ -0.01
ATXN3P54252 AC024681.1-201ENST00000521917 487 ntBASIC14.97□□□□□ -0.01
ATXN3P54252 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.97□□□□□ -0.01
ATXN3P54252 AC005730.2-201ENST00000564549 1184 ntBASIC14.97□□□□□ -0.01
ATXN3P54252 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.97□□□□□ -0.01
ATXN3P54252 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC14.97□□□□□ -0.01
ATXN3P54252 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
ATXN3P54252 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ATXN3P54252 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 KRT8P14-201ENST00000414254 1442 ntBASIC14.97□□□□□ -0.01
ATXN3P54252 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.97□□□□□ -0.01
ATXN3P54252 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.97□□□□□ -0.01
ATXN3P54252 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ATXN3P54252 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.96□□□□□ -0.01
ATXN3P54252 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ATXN3P54252 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.96□□□□□ -0.01
ATXN3P54252 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.96□□□□□ -0.01
ATXN3P54252 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 BX640514.1-201ENST00000583223 1918 ntBASIC14.96□□□□□ -0.01
ATXN3P54252 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
ATXN3P54252 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 CICP11-201ENST00000434745 2827 ntBASIC14.96□□□□□ -0.01
ATXN3P54252 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.96□□□□□ -0.01
ATXN3P54252 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
ATXN3P54252 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ATXN3P54252 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.96□□□□□ -0.01
ATXN3P54252 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.96□□□□□ -0.01
ATXN3P54252 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.96□□□□□ -0.01
ATXN3P54252 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.96□□□□□ -0.01
ATXN3P54252 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ATXN3P54252 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.96□□□□□ -0.01
ATXN3P54252 AL354877.1-201ENST00000424412 413 ntBASIC14.96□□□□□ -0.01
ATXN3P54252 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.96□□□□□ -0.01
ATXN3P54252 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.96□□□□□ -0.01
ATXN3P54252 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.96□□□□□ -0.01
ATXN3P54252 HIST2H2BB-201ENST00000449108 381 ntBASIC14.96□□□□□ -0.01
ATXN3P54252 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.96□□□□□ -0.01
ATXN3P54252 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.96□□□□□ -0.01
ATXN3P54252 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms