Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.56□□□□□ -0.56
CDC34P49427 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
CDC34P49427 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
CDC34P49427 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.56□□□□□ -0.56
CDC34P49427 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.56□□□□□ -0.56
CDC34P49427 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 MRPL37P1-201ENST00000592451 1337 ntBASIC11.56□□□□□ -0.56
CDC34P49427 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.56□□□□□ -0.56
CDC34P49427 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CDC34P49427 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CDC34P49427 AC135782.3-201ENST00000562782 2105 ntBASIC11.56□□□□□ -0.56
CDC34P49427 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 RERG-209ENST00000546331 1383 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.55□□□□□ -0.56
CDC34P49427 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
CDC34P49427 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC34P49427 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CDC34P49427 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC34P49427 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 KHSRPP1-201ENST00000427983 1768 ntBASIC11.55□□□□□ -0.56
CDC34P49427 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
CDC34P49427 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 AC023274.1-201ENST00000418278 595 ntBASIC11.55□□□□□ -0.56
CDC34P49427 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.55□□□□□ -0.56
CDC34P49427 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.55□□□□□ -0.56
CDC34P49427 TLE1P1-201ENST00000422965 589 ntBASIC11.55□□□□□ -0.56
CDC34P49427 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 GAPDHP40-201ENST00000505218 1006 ntBASIC11.55□□□□□ -0.56
CDC34P49427 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC11.55□□□□□ -0.56
CDC34P49427 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.55□□□□□ -0.56
CDC34P49427 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.55□□□□□ -0.56
CDC34P49427 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC34P49427 MIR6080-201ENST00000617359 66 ntBASIC11.55□□□□□ -0.56
CDC34P49427 FAM197Y3-203ENST00000618346 717 ntBASIC11.55□□□□□ -0.56
CDC34P49427 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.55□□□□□ -0.56
CDC34P49427 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC34P49427 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC34P49427 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CDC34P49427 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC34P49427 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.54□□□□□ -0.56
CDC34P49427 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC34P49427 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC34P49427 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CDC34P49427 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC34P49427 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms