Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 AC100850.1-201ENST00000506768 649 ntBASIC12.98□□□□□ -0.33
CSNK1A1P48729 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.98□□□□□ -0.33
CSNK1A1P48729 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 DUX4L46-201ENST00000566845 751 ntBASIC12.98□□□□□ -0.33
CSNK1A1P48729 EEF1DP1-201ENST00000585891 896 ntBASIC12.98□□□□□ -0.33
CSNK1A1P48729 AC132192.2-201ENST00000596206 1147 ntBASIC12.98□□□□□ -0.33
CSNK1A1P48729 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.98□□□□□ -0.33
CSNK1A1P48729 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CSNK1A1P48729 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AC012617.1-204ENST00000586340 2305 ntBASIC12.97□□□□□ -0.33
CSNK1A1P48729 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 E2F3P2-201ENST00000447755 1422 ntBASIC12.97□□□□□ -0.33
CSNK1A1P48729 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 OR8S1-201ENST00000310194 1080 ntBASIC12.97□□□□□ -0.33
CSNK1A1P48729 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.97□□□□□ -0.33
CSNK1A1P48729 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AC005586.2-201ENST00000563946 837 ntBASIC12.97□□□□□ -0.33
CSNK1A1P48729 DUX4L45-201ENST00000566406 1057 ntBASIC12.97□□□□□ -0.33
CSNK1A1P48729 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AC010328.2-201ENST00000597698 1111 ntBASIC12.97□□□□□ -0.33
CSNK1A1P48729 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CSNK1A1P48729 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.97□□□□□ -0.33
CSNK1A1P48729 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 AC005840.4-201ENST00000541242 2494 ntBASIC12.96□□□□□ -0.33
CSNK1A1P48729 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
CSNK1A1P48729 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CSNK1A1P48729 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms