Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ATP2B3-203ENST00000359149 4234 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AC099494.3-201ENST00000623645 1722 ntBASIC9.41□□□□□ -0.9
PCP4P48539 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AL590822.2-201ENST00000606533 4196 ntBASIC9.41□□□□□ -0.9
PCP4P48539 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
PCP4P48539 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC9.41□□□□□ -0.9
PCP4P48539 EXOC1-203ENST00000381295 3551 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AC022929.2-201ENST00000612997 2127 ntBASIC9.41□□□□□ -0.9
PCP4P48539 C8orf46-201ENST00000305454 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 NTM-221ENST00000539799 2550 ntTSL 5 BASIC9.41□□□□□ -0.9
PCP4P48539 AC138761.4-202ENST00000577956 2552 ntBASIC9.41□□□□□ -0.9
PCP4P48539 AC090241.3-201ENST00000621730 2599 ntBASIC9.41□□□□□ -0.9
PCP4P48539 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC9.41□□□□□ -0.9
PCP4P48539 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC9.41□□□□□ -0.9
PCP4P48539 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC9.41□□□□□ -0.9
PCP4P48539 CTAGE5-202ENST00000280083 3860 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
PCP4P48539 IP6K2-219ENST00000446860 1565 ntTSL 2 BASIC9.41□□□□□ -0.9
PCP4P48539 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC9.41□□□□□ -0.9
PCP4P48539 ZNF223-201ENST00000434772 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 KLHL1-201ENST00000377844 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
PCP4P48539 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 RAMP2-AS1-205ENST00000592670 3118 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
PCP4P48539 ZNF132-201ENST00000254166 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 CDRT1-204ENST00000395906 2571 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 APTX-208ENST00000436040 2168 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 AC005072.1-201ENST00000606640 1779 ntBASIC9.4□□□□□ -0.9
PCP4P48539 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
PCP4P48539 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 AC009169.1-201ENST00000563784 1377 ntBASIC9.4□□□□□ -0.9
PCP4P48539 CCDC144NL-AS1-207ENST00000577537 3727 ntTSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 RBFOX1-201ENST00000311745 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 AC026333.3-201ENST00000543611 1731 ntTSL 4 BASIC9.4□□□□□ -0.9
PCP4P48539 LINC00346-201ENST00000538077 6265 ntBASIC9.4□□□□□ -0.9
PCP4P48539 AC005703.6-201ENST00000623265 1329 ntBASIC9.4□□□□□ -0.9
PCP4P48539 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 LRRC37A7P-201ENST00000583900 2759 ntBASIC9.4□□□□□ -0.9
PCP4P48539 SP100-206ENST00000409897 2037 ntTSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 CLEC4F-202ENST00000426626 2012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 EBPL-202ENST00000378268 680 ntTSL 3 BASIC9.4□□□□□ -0.9
PCP4P48539 RN7SKP297-201ENST00000411270 282 ntBASIC9.4□□□□□ -0.9
PCP4P48539 POU5F1P4-201ENST00000413175 1085 ntBASIC9.4□□□□□ -0.9
PCP4P48539 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC9.4□□□□□ -0.9
PCP4P48539 RP9P-202ENST00000450133 1212 ntBASIC9.4□□□□□ -0.9
PCP4P48539 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC9.4□□□□□ -0.9
PCP4P48539 AC053503.5-201ENST00000601508 636 ntBASIC9.4□□□□□ -0.9
PCP4P48539 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC9.4□□□□□ -0.9
PCP4P48539 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
PCP4P48539 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC9.4□□□□□ -0.9
PCP4P48539 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 ESR1-202ENST00000338799 3335 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
PCP4P48539 THAP12P2-201ENST00000489193 2267 ntBASIC9.4□□□□□ -0.9
PCP4P48539 ELP3-218ENST00000524103 1914 ntTSL 2 BASIC9.4□□□□□ -0.9
PCP4P48539 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
PCP4P48539 SRRT-213ENST00000611405 2905 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
PCP4P48539 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PCP4P48539 SGK1-204ENST00000367858 3201 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PCP4P48539 ACVR1-207ENST00000434821 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PCP4P48539 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
PCP4P48539 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.91
PCP4P48539 PXK-210ENST00000479241 2817 ntTSL 2 BASIC9.4□□□□□ -0.91
PCP4P48539 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PCP4P48539 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC9.4□□□□□ -0.91
PCP4P48539 AC098679.3-201ENST00000512016 3115 ntTSL 2 BASIC9.4□□□□□ -0.91
PCP4P48539 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PCP4P48539 DDX4-201ENST00000353507 2778 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PCP4P48539 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
PCP4P48539 TGFA-201ENST00000295400 4310 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
PCP4P48539 TTI2-202ENST00000431156 2363 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 AC009227.1-201ENST00000434635 2362 ntTSL 2 BASIC9.39□□□□□ -0.91
PCP4P48539 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 CTCFL-207ENST00000429804 3864 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 MEG3-220ENST00000522771 6984 ntTSL 5 BASIC9.39□□□□□ -0.91
PCP4P48539 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
PCP4P48539 FNIP2-201ENST00000264433 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 GDNF-201ENST00000326524 3810 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PCP4P48539 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms