RNA–Protein interactions for RNA: ENST00000377844.8

KLHL1-201, Transcript of kelch like family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL1, Length 4,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1-201ENST00000377844 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
KLHL1-201ENST00000377844 DCAF8L2P0C7V8 631 aa19.11■□□□□ 0.65
KLHL1-201ENST00000377844 SUPT5HO00267 1087 aaKnown RBP18.84■□□□□ 0.61
KLHL1-201ENST00000377844 SHROOM4Q9ULL8 1493 aa18.59■□□□□ 0.57
KLHL1-201ENST00000377844 PCGF6Q9BYE7 350 aa18■□□□□ 0.47
KLHL1-201ENST00000377844 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
KLHL1-201ENST00000377844 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
KLHL1-201ENST00000377844 HRCP23327 699 aa17.43■□□□□ 0.38
KLHL1-201ENST00000377844 TTBK1Q5TCY1 1321 aaPredicted RBP17.42■□□□□ 0.38
KLHL1-201ENST00000377844 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
KLHL1-201ENST00000377844 ZEB1P37275 1124 aaPredicted RBP17.34■□□□□ 0.37
KLHL1-201ENST00000377844 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
KLHL1-201ENST00000377844 CCER1Q8TC90 406 aaPredicted RBP17.24■□□□□ 0.35
KLHL1-201ENST00000377844 LOC105371045A0A1W2PR82 267 aa17.24■□□□□ 0.35
KLHL1-201ENST00000377844 PPARGC1BQ86YN6 1023 aaKnown RBP17.21■□□□□ 0.35
KLHL1-201ENST00000377844 APLP2Q06481 763 aa17.2■□□□□ 0.34
KLHL1-201ENST00000377844 TRIM26Q12899 539 aaPredicted RBP17.19■□□□□ 0.34
KLHL1-201ENST00000377844 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
KLHL1-201ENST00000377844 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
KLHL1-201ENST00000377844 RANGAP1P46060 587 aaPredicted RBP17.01■□□□□ 0.31
KLHL1-201ENST00000377844 UBTFP17480 764 aaKnown RBP16.94■□□□□ 0.3
KLHL1-201ENST00000377844 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
KLHL1-201ENST00000377844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
KLHL1-201ENST00000377844 MYT1Q01538 1121 aa16.6■□□□□ 0.25
KLHL1-201ENST00000377844 ATP1B4Q9UN42 357 aaPredicted RBP16.59■□□□□ 0.25
KLHL1-201ENST00000377844 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.25
KLHL1-201ENST00000377844 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.24
KLHL1-201ENST00000377844 ERICH6Q7L0X2 663 aa16.48■□□□□ 0.23
KLHL1-201ENST00000377844 NEFLP07196 543 aa16.47■□□□□ 0.23
KLHL1-201ENST00000377844 ITGAEP38570 1179 aa16.44■□□□□ 0.22
KLHL1-201ENST00000377844 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
KLHL1-201ENST00000377844 ACIN1Q9UKV3 1341 aaKnown RBP16.28■□□□□ 0.2
KLHL1-201ENST00000377844 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
KLHL1-201ENST00000377844 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
KLHL1-201ENST00000377844 ZNF316A6NFI3 1004 aaPredicted RBP16.18■□□□□ 0.18
KLHL1-201ENST00000377844 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
KLHL1-201ENST00000377844 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
KLHL1-201ENST00000377844 NEUROD1Q13562 356 aa16.08■□□□□ 0.17
KLHL1-201ENST00000377844 ABCC9O60706 1549 aa16.06■□□□□ 0.16
KLHL1-201ENST00000377844 BCANQ96GW7 911 aa16.04■□□□□ 0.16
KLHL1-201ENST00000377844 CNGB1Q14028 1251 aaPredicted RBP16.03■□□□□ 0.16
KLHL1-201ENST00000377844 CSRNP3Q8WYN3 585 aa16.03■□□□□ 0.16
KLHL1-201ENST00000377844 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
KLHL1-201ENST00000377844 POLR3GLQ9BT43 218 aa16.01■□□□□ 0.15
KLHL1-201ENST00000377844 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
KLHL1-201ENST00000377844 ANP32CO43423 234 aa15.81■□□□□ 0.12
KLHL1-201ENST00000377844 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
KLHL1-201ENST00000377844 MIER1Q8N108 512 aa15.8■□□□□ 0.12
KLHL1-201ENST00000377844 TRIM52Q96A61 297 aa15.74■□□□□ 0.11
KLHL1-201ENST00000377844 RSF1Q96T23 1441 aaPredicted RBP15.73■□□□□ 0.11
KLHL1-201ENST00000377844 DAXXQ9UER7 740 aaPredicted RBP15.71■□□□□ 0.11
KLHL1-201ENST00000377844 P3H3Q8IVL6 736 aa15.7■□□□□ 0.1
KLHL1-201ENST00000377844 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
KLHL1-201ENST00000377844 FKBP8Q14318 412 aa15.69■□□□□ 0.1
KLHL1-201ENST00000377844 CDK11AQ9UQ88 783 aaPredicted RBP15.68■□□□□ 0.1
KLHL1-201ENST00000377844 DDX10Q13206 875 aaKnown RBP15.66■□□□□ 0.1
KLHL1-201ENST00000377844 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
KLHL1-201ENST00000377844 CLSPNQ9HAW4 1339 aa15.61■□□□□ 0.09
KLHL1-201ENST00000377844 ZNF326Q5BKZ1 582 aaKnown RBP15.59■□□□□ 0.09
KLHL1-201ENST00000377844 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
KLHL1-201ENST00000377844 HNRNPUQ00839 825 aaKnown RBP eCLIP15.52■□□□□ 0.07
KLHL1-201ENST00000377844 CLIP1P30622 1438 aa15.51■□□□□ 0.07
KLHL1-201ENST00000377844 HIRIP3Q9BW71 556 aaPredicted RBP15.51■□□□□ 0.07
KLHL1-201ENST00000377844 MYT1LQ9UL68 1186 aa15.49■□□□□ 0.07
KLHL1-201ENST00000377844 ARID3CA6NKF2 412 aa15.48■□□□□ 0.07
KLHL1-201ENST00000377844 TONSLQ96HA7 1378 aa15.46■□□□□ 0.07
KLHL1-201ENST00000377844 TNIKQ9UKE5 1360 aa15.42■□□□□ 0.06
KLHL1-201ENST00000377844 FAM9BQ8IZU0 186 aa15.41■□□□□ 0.06
KLHL1-201ENST00000377844 IRX6P78412 446 aaPredicted RBP15.39■□□□□ 0.05
KLHL1-201ENST00000377844 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
KLHL1-201ENST00000377844 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
KLHL1-201ENST00000377844 EEA1Q15075 1411 aa15.37■□□□□ 0.05
KLHL1-201ENST00000377844 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
KLHL1-201ENST00000377844 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
KLHL1-201ENST00000377844 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
KLHL1-201ENST00000377844 NPM2Q86SE8 214 aaKnown RBP15.33■□□□□ 0.04
KLHL1-201ENST00000377844 CHIC2Q9UKJ5 165 aa15.32■□□□□ 0.04
KLHL1-201ENST00000377844 SUPT16HQ9Y5B9 1047 aaKnown RBP15.31■□□□□ 0.04
KLHL1-201ENST00000377844 WRNQ14191 1432 aaPredicted RBP eCLIP15.31■□□□□ 0.04
KLHL1-201ENST00000377844 SOGA1O94964 1423 aa15.3■□□□□ 0.04
KLHL1-201ENST00000377844 ZNF777Q9ULD5 760 aaPredicted RBP15.28■□□□□ 0.04
KLHL1-201ENST00000377844 MRS2Q9HD23 443 aa15.27■□□□□ 0.03
KLHL1-201ENST00000377844 ANP32EQ9BTT0 268 aa15.26■□□□□ 0.03
KLHL1-201ENST00000377844 SALL2Q9Y467 1007 aaPredicted RBP15.26■□□□□ 0.03
KLHL1-201ENST00000377844 FBLN2P98095 1184 aa15.26■□□□□ 0.03
KLHL1-201ENST00000377844 NBR1Q14596 966 aa15.24■□□□□ 0.03
KLHL1-201ENST00000377844 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
KLHL1-201ENST00000377844 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
KLHL1-201ENST00000377844 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
KLHL1-201ENST00000377844 MTUS2Q5JR59 1369 aa15.18■□□□□ 0.02
KLHL1-201ENST00000377844 TMC1Q8TDI8 760 aa15.18■□□□□ 0.02
KLHL1-201ENST00000377844 EIF4G2P78344 907 aaKnown RBP eCLIP15.17■□□□□ 0.02
KLHL1-201ENST00000377844 RRP7BPQ9NSQ0 103 aa15.17■□□□□ 0.02
KLHL1-201ENST00000377844 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
KLHL1-201ENST00000377844 MROH2BQ7Z745 1585 aa15.16■□□□□ 0.02
KLHL1-201ENST00000377844 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
KLHL1-201ENST00000377844 ZBTB47Q9UFB7 747 aaPredicted RBP15.15■□□□□ 0.02
KLHL1-201ENST00000377844 CANXP27824 592 aaKnown RBP15.12■□□□□ 0.01
KLHL1-201ENST00000377844 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
KLHL1-201ENST00000377844 KANK4Q5T7N3 995 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms