Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CBX5P45973 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.63□□□□□ -0.39
CBX5P45973 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CBX5P45973 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CBX5P45973 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CBX5P45973 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CBX5P45973 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CBX5P45973 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CBX5P45973 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CBX5P45973 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 KRT8P14-201ENST00000414254 1442 ntBASIC12.62□□□□□ -0.39
CBX5P45973 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CBX5P45973 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CBX5P45973 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.62□□□□□ -0.39
CBX5P45973 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.62□□□□□ -0.39
CBX5P45973 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.62□□□□□ -0.39
CBX5P45973 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CBX5P45973 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.62□□□□□ -0.39
CBX5P45973 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.62□□□□□ -0.39
CBX5P45973 AC010336.2-201ENST00000564226 506 ntBASIC12.62□□□□□ -0.39
CBX5P45973 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.62□□□□□ -0.39
CBX5P45973 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC12.62□□□□□ -0.39
CBX5P45973 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.62□□□□□ -0.39
CBX5P45973 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.62□□□□□ -0.39
CBX5P45973 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC12.62□□□□□ -0.39
CBX5P45973 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.62□□□□□ -0.39
CBX5P45973 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CBX5P45973 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CBX5P45973 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.62□□□□□ -0.39
CBX5P45973 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CBX5P45973 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.62□□□□□ -0.39
CBX5P45973 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CBX5P45973 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CBX5P45973 AC010336.1-201ENST00000539278 4739 ntBASIC12.62□□□□□ -0.39
CBX5P45973 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC12.61□□□□□ -0.39
CBX5P45973 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.61□□□□□ -0.39
CBX5P45973 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CBX5P45973 AC073548.1-201ENST00000624088 1882 ntBASIC12.61□□□□□ -0.39
CBX5P45973 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CBX5P45973 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CBX5P45973 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CBX5P45973 CLK3P2-201ENST00000427566 1453 ntBASIC12.61□□□□□ -0.39
CBX5P45973 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CBX5P45973 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.61□□□□□ -0.39
CBX5P45973 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 MIR940-201ENST00000401276 94 ntBASIC12.61□□□□□ -0.39
CBX5P45973 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.61□□□□□ -0.39
CBX5P45973 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.61□□□□□ -0.39
CBX5P45973 TLE1P1-201ENST00000422965 589 ntBASIC12.61□□□□□ -0.39
CBX5P45973 DNAJB3-201ENST00000446806 729 ntBASIC12.61□□□□□ -0.39
CBX5P45973 AC023141.5-201ENST00000458585 616 ntBASIC12.61□□□□□ -0.39
CBX5P45973 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CBX5P45973 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.61□□□□□ -0.39
CBX5P45973 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CBX5P45973 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.61□□□□□ -0.39
CBX5P45973 KRT18P58-201ENST00000527480 1120 ntBASIC12.61□□□□□ -0.39
CBX5P45973 AL512356.2-201ENST00000546955 174 ntBASIC12.61□□□□□ -0.39
CBX5P45973 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.61□□□□□ -0.39
CBX5P45973 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.61□□□□□ -0.39
CBX5P45973 TEX28P1-201ENST00000613479 1221 ntBASIC12.61□□□□□ -0.39
CBX5P45973 TEX28P2-201ENST00000617764 1221 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms