Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.94□□□□□ -0.5
CEACAM3P40198 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.94□□□□□ -0.5
CEACAM3P40198 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CEACAM3P40198 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC11.94□□□□□ -0.5
CEACAM3P40198 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
CEACAM3P40198 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CEACAM3P40198 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.93□□□□□ -0.5
CEACAM3P40198 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.93□□□□□ -0.5
CEACAM3P40198 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.93□□□□□ -0.5
CEACAM3P40198 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.93□□□□□ -0.5
CEACAM3P40198 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC11.93□□□□□ -0.5
CEACAM3P40198 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CEACAM3P40198 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CEACAM3P40198 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CEACAM3P40198 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
CEACAM3P40198 BRWD1P1-201ENST00000401091 371 ntBASIC11.93□□□□□ -0.5
CEACAM3P40198 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC11.93□□□□□ -0.5
CEACAM3P40198 AC012441.2-201ENST00000444843 739 ntBASIC11.93□□□□□ -0.5
CEACAM3P40198 BNIP3P42-201ENST00000454982 569 ntBASIC11.93□□□□□ -0.5
CEACAM3P40198 CICP12-201ENST00000455801 843 ntBASIC11.93□□□□□ -0.5
CEACAM3P40198 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.93□□□□□ -0.5
CEACAM3P40198 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.93□□□□□ -0.5
CEACAM3P40198 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.93□□□□□ -0.5
CEACAM3P40198 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.93□□□□□ -0.5
CEACAM3P40198 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 BNIP3P29-201ENST00000598302 571 ntBASIC11.93□□□□□ -0.5
CEACAM3P40198 AC011447.5-201ENST00000616168 564 ntBASIC11.93□□□□□ -0.5
CEACAM3P40198 AC009542.2-202ENST00000619004 1067 ntBASIC11.93□□□□□ -0.5
CEACAM3P40198 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 AC073869.1-201ENST00000415574 2762 ntBASIC11.93□□□□□ -0.5
CEACAM3P40198 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.93□□□□□ -0.5
CEACAM3P40198 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CEACAM3P40198 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.92□□□□□ -0.5
CEACAM3P40198 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 AL590440.2-201ENST00000641973 1595 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
CEACAM3P40198 KHSRPP1-201ENST00000427983 1768 ntBASIC11.92□□□□□ -0.5
CEACAM3P40198 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.92□□□□□ -0.5
CEACAM3P40198 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CEACAM3P40198 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms