Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 AC015656.1-201ENST00000624209 3578 ntBASIC12.51□□□□□ -0.41
TNFSF4P23510 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.51□□□□□ -0.41
TNFSF4P23510 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.51□□□□□ -0.41
TNFSF4P23510 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.51□□□□□ -0.41
TNFSF4P23510 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TNFSF4P23510 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 AC139749.1-202ENST00000617529 3139 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.5□□□□□ -0.41
TNFSF4P23510 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TNFSF4P23510 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 AC007274.1-201ENST00000439805 662 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.5□□□□□ -0.41
TNFSF4P23510 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 AL591846.1-201ENST00000451736 433 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 TPT1P11-201ENST00000458482 498 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 AC106794.1-201ENST00000506935 792 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.5□□□□□ -0.41
TNFSF4P23510 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.5□□□□□ -0.41
TNFSF4P23510 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 AL022328.3-201ENST00000607943 679 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 AL096828.3-201ENST00000615354 462 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 AL136295.7-201ENST00000619226 1200 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 E2F3P2-201ENST00000447755 1422 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.5□□□□□ -0.41
TNFSF4P23510 MTHFR-210ENST00000641407 2387 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.5□□□□□ -0.41
TNFSF4P23510 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.5□□□□□ -0.41
TNFSF4P23510 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TNFSF4P23510 AC007686.3-201ENST00000619017 3487 ntBASIC12.5□□□□□ -0.41
TNFSF4P23510 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TNFSF4P23510 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.49□□□□□ -0.41
TNFSF4P23510 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TNFSF4P23510 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.49□□□□□ -0.41
TNFSF4P23510 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TNFSF4P23510 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms