Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
NR4A1P22736 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NR4A1P22736 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.62□□□□□ -0.23
NR4A1P22736 AC190387.1-201ENST00000551683 408 ntBASIC13.62□□□□□ -0.23
NR4A1P22736 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.62□□□□□ -0.23
NR4A1P22736 AL132655.2-201ENST00000596276 594 ntBASIC13.62□□□□□ -0.23
NR4A1P22736 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.62□□□□□ -0.23
NR4A1P22736 AF228730.6-201ENST00000641497 218 ntBASIC13.62□□□□□ -0.23
NR4A1P22736 AC084121.3-201ENST00000641716 218 ntBASIC13.62□□□□□ -0.23
NR4A1P22736 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NR4A1P22736 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NR4A1P22736 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.62□□□□□ -0.23
NR4A1P22736 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.62□□□□□ -0.23
NR4A1P22736 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.62□□□□□ -0.23
NR4A1P22736 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.62□□□□□ -0.23
NR4A1P22736 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NR4A1P22736 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.62□□□□□ -0.23
NR4A1P22736 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
NR4A1P22736 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NR4A1P22736 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NR4A1P22736 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.61□□□□□ -0.23
NR4A1P22736 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.61□□□□□ -0.23
NR4A1P22736 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 AGGF1P1-201ENST00000509500 2073 ntBASIC13.61□□□□□ -0.23
NR4A1P22736 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.61□□□□□ -0.23
NR4A1P22736 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NR4A1P22736 AC087499.6-201ENST00000411576 835 ntBASIC13.61□□□□□ -0.23
NR4A1P22736 AC015922.1-201ENST00000421102 1152 ntBASIC13.61□□□□□ -0.23
NR4A1P22736 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.61□□□□□ -0.23
NR4A1P22736 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 CRB3P1-201ENST00000449338 276 ntBASIC13.61□□□□□ -0.23
NR4A1P22736 AL589987.1-201ENST00000453380 819 ntBASIC13.61□□□□□ -0.23
NR4A1P22736 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 SLED1-202ENST00000512051 380 ntBASIC13.61□□□□□ -0.23
NR4A1P22736 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.61□□□□□ -0.23
NR4A1P22736 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.61□□□□□ -0.23
NR4A1P22736 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NR4A1P22736 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.61□□□□□ -0.23
NR4A1P22736 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
NR4A1P22736 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.61□□□□□ -0.23
NR4A1P22736 AC004790.1-201ENST00000612686 536 ntBASIC13.61□□□□□ -0.23
NR4A1P22736 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.61□□□□□ -0.23
NR4A1P22736 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
NR4A1P22736 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NR4A1P22736 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NR4A1P22736 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms