Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NFKB1P19838 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NFKB1P19838 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NFKB1P19838 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.8□□□□□ -0.04
NFKB1P19838 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.8□□□□□ -0.04
NFKB1P19838 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
NFKB1P19838 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NFKB1P19838 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
NFKB1P19838 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
NFKB1P19838 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NFKB1P19838 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.79□□□□□ -0.04
NFKB1P19838 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NFKB1P19838 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 TUBB8P4-201ENST00000511806 1324 ntBASIC14.79□□□□□ -0.04
NFKB1P19838 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.79□□□□□ -0.04
NFKB1P19838 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NFKB1P19838 AL022313.4-201ENST00000562756 2046 ntBASIC14.79□□□□□ -0.04
NFKB1P19838 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.79□□□□□ -0.04
NFKB1P19838 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.79□□□□□ -0.04
NFKB1P19838 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.79□□□□□ -0.04
NFKB1P19838 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NFKB1P19838 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 AC090643.2-201ENST00000623442 2029 ntBASIC14.78□□□□□ -0.04
NFKB1P19838 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.78□□□□□ -0.04
NFKB1P19838 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
NFKB1P19838 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.78□□□□□ -0.04
NFKB1P19838 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.78□□□□□ -0.04
NFKB1P19838 AL354877.1-201ENST00000424412 413 ntBASIC14.78□□□□□ -0.04
NFKB1P19838 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NFKB1P19838 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.78□□□□□ -0.04
NFKB1P19838 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.78□□□□□ -0.04
NFKB1P19838 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.78□□□□□ -0.04
NFKB1P19838 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.78□□□□□ -0.04
NFKB1P19838 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
NFKB1P19838 RBM8B-201ENST00000555532 525 ntBASIC14.78□□□□□ -0.04
NFKB1P19838 AC100827.2-201ENST00000563214 1194 ntBASIC14.78□□□□□ -0.04
NFKB1P19838 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.78□□□□□ -0.04
NFKB1P19838 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.78□□□□□ -0.04
NFKB1P19838 MIR6805-201ENST00000615055 62 ntBASIC14.78□□□□□ -0.04
NFKB1P19838 AL162426.1-201ENST00000624141 743 ntBASIC14.78□□□□□ -0.04
NFKB1P19838 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 Z98259.2-201ENST00000641583 609 ntBASIC14.78□□□□□ -0.04
NFKB1P19838 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.78□□□□□ -0.04
NFKB1P19838 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.78□□□□□ -0.04
NFKB1P19838 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NFKB1P19838 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
NFKB1P19838 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.78□□□□□ -0.04
NFKB1P19838 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.78□□□□□ -0.04
NFKB1P19838 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NFKB1P19838 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NFKB1P19838 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.77□□□□□ -0.04
NFKB1P19838 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NFKB1P19838 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.77□□□□□ -0.04
NFKB1P19838 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NFKB1P19838 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.77□□□□□ -0.04
NFKB1P19838 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms