Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.46□□□□□ -0.25
BMP4P12644 HNRNPUP1-201ENST00000554987 333 ntBASIC13.46□□□□□ -0.25
BMP4P12644 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.46□□□□□ -0.25
BMP4P12644 WASH4P-201ENST00000564273 1246 ntBASIC13.46□□□□□ -0.25
BMP4P12644 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.46□□□□□ -0.25
BMP4P12644 RN7SL121P-201ENST00000584223 273 ntBASIC13.46□□□□□ -0.25
BMP4P12644 IGHV3-72-202ENST00000621503 303 ntBASIC13.46□□□□□ -0.25
BMP4P12644 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
BMP4P12644 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
BMP4P12644 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
BMP4P12644 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.46□□□□□ -0.25
BMP4P12644 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
BMP4P12644 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.46□□□□□ -0.25
BMP4P12644 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
BMP4P12644 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
BMP4P12644 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
BMP4P12644 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
BMP4P12644 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
BMP4P12644 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.46□□□□□ -0.26
BMP4P12644 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.46□□□□□ -0.26
BMP4P12644 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
BMP4P12644 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
BMP4P12644 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
BMP4P12644 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
BMP4P12644 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
BMP4P12644 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
BMP4P12644 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
BMP4P12644 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.46□□□□□ -0.26
BMP4P12644 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.46□□□□□ -0.26
BMP4P12644 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
BMP4P12644 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 REXO1L4P-201ENST00000605109 1937 ntBASIC13.45□□□□□ -0.26
BMP4P12644 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
BMP4P12644 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 DMBT1P1-203ENST00000636837 4628 ntBASIC13.45□□□□□ -0.26
BMP4P12644 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 AC134915.1-201ENST00000426461 574 ntBASIC13.45□□□□□ -0.26
BMP4P12644 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.45□□□□□ -0.26
BMP4P12644 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.45□□□□□ -0.26
BMP4P12644 FAM86LP-201ENST00000478302 853 ntBASIC13.45□□□□□ -0.26
BMP4P12644 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC13.45□□□□□ -0.26
BMP4P12644 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.45□□□□□ -0.26
BMP4P12644 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.45□□□□□ -0.26
BMP4P12644 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.45□□□□□ -0.26
BMP4P12644 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.45□□□□□ -0.26
BMP4P12644 LINC01115-203ENST00000606068 577 ntBASIC13.45□□□□□ -0.26
BMP4P12644 OR13I1P-201ENST00000609811 1264 ntBASIC13.45□□□□□ -0.26
BMP4P12644 AC004790.1-201ENST00000612686 536 ntBASIC13.45□□□□□ -0.26
BMP4P12644 WFDC1-204ENST00000613603 549 ntBASIC13.45□□□□□ -0.26
BMP4P12644 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
BMP4P12644 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
BMP4P12644 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.45□□□□□ -0.26
BMP4P12644 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
BMP4P12644 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
BMP4P12644 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.44□□□□□ -0.26
BMP4P12644 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms