Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRNB1P11230 AC022532.1-201ENST00000624563 1728 ntBASIC14.7□□□□□ -0.06
CHRNB1P11230 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 SSR4P1-203ENST00000599569 2260 ntBASIC14.7□□□□□ -0.06
CHRNB1P11230 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CHRNB1P11230 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRNB1P11230 AL139008.1-201ENST00000437894 228 ntBASIC14.7□□□□□ -0.06
CHRNB1P11230 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.7□□□□□ -0.06
CHRNB1P11230 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 AC006158.1-201ENST00000610661 249 ntBASIC14.7□□□□□ -0.06
CHRNB1P11230 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CHRNB1P11230 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CHRNB1P11230 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 AC092135.3-201ENST00000624151 1846 ntBASIC14.7□□□□□ -0.06
CHRNB1P11230 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.7□□□□□ -0.06
CHRNB1P11230 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.7□□□□□ -0.06
CHRNB1P11230 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.7□□□□□ -0.06
CHRNB1P11230 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHRNB1P11230 AC007191.1-201ENST00000623179 2995 ntBASIC14.7□□□□□ -0.06
CHRNB1P11230 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CHRNB1P11230 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CHRNB1P11230 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 AP002353.1-201ENST00000528257 1599 ntBASIC14.69□□□□□ -0.06
CHRNB1P11230 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC005089.1-201ENST00000619486 2241 ntBASIC14.69□□□□□ -0.06
CHRNB1P11230 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CHRNB1P11230 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.69□□□□□ -0.06
CHRNB1P11230 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC073869.2-201ENST00000417338 1026 ntBASIC14.69□□□□□ -0.06
CHRNB1P11230 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRNB1P11230 RN7SL277P-201ENST00000481521 288 ntBASIC14.69□□□□□ -0.06
CHRNB1P11230 AREG-202ENST00000502307 956 ntTSL 5 BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC007952.4-201ENST00000573866 637 ntBASIC14.69□□□□□ -0.06
CHRNB1P11230 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
CHRNB1P11230 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CHRNB1P11230 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CHRNB1P11230 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHRNB1P11230 AC139712.1-201ENST00000378256 1875 ntBASIC14.69□□□□□ -0.06
CHRNB1P11230 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRNB1P11230 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CHRNB1P11230 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.69□□□□□ -0.06
CHRNB1P11230 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.69□□□□□ -0.06
CHRNB1P11230 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHRNB1P11230 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
CHRNB1P11230 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.68□□□□□ -0.06
CHRNB1P11230 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB1P11230 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNB1P11230 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNB1P11230 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CHRNB1P11230 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB1P11230 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CHRNB1P11230 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CHRNB1P11230 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB1P11230 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CHRNB1P11230 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.68□□□□□ -0.06
CHRNB1P11230 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHRNB1P11230 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.68□□□□□ -0.06
CHRNB1P11230 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms