Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 INVS-201ENST00000262456 2968 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 AL590440.2-201ENST00000641973 1595 ntBASIC15.82■□□□□ 0.12
CCDC172P0C7W6 MSTO2P-201ENST00000314835 1709 ntBASIC15.82■□□□□ 0.12
CCDC172P0C7W6 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCDC172P0C7W6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 C2orf27AP3-201ENST00000434123 579 ntBASIC15.81■□□□□ 0.12
CCDC172P0C7W6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 AC012617.1-204ENST00000586340 2305 ntBASIC15.81■□□□□ 0.12
CCDC172P0C7W6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 AL354718.3-201ENST00000616414 581 ntBASIC15.81■□□□□ 0.12
CCDC172P0C7W6 CR382287.1-201ENST00000623954 586 ntBASIC15.81■□□□□ 0.12
CCDC172P0C7W6 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 CICP16-201ENST00000502609 2813 ntBASIC15.81■□□□□ 0.12
CCDC172P0C7W6 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC172P0C7W6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.8■□□□□ 0.12
CCDC172P0C7W6 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 RN7SKP175-201ENST00000408472 289 ntBASIC15.8■□□□□ 0.12
CCDC172P0C7W6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC172P0C7W6 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms