Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 RPL13P2-201ENST00000440687 659 ntBASIC12.67□□□□□ -0.38
CSF1P09603 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.67□□□□□ -0.38
CSF1P09603 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.67□□□□□ -0.38
CSF1P09603 SERBP1P3-201ENST00000459980 809 ntBASIC12.67□□□□□ -0.38
CSF1P09603 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.67□□□□□ -0.38
CSF1P09603 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 API5-211ENST00000534695 560 ntTSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.67□□□□□ -0.38
CSF1P09603 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 AL844908.2-201ENST00000609461 460 ntBASIC12.67□□□□□ -0.38
CSF1P09603 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.67□□□□□ -0.38
CSF1P09603 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CSF1P09603 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CSF1P09603 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CSF1P09603 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CSF1P09603 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.67□□□□□ -0.38
CSF1P09603 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 HSPA8P5-201ENST00000456928 2069 ntBASIC12.66□□□□□ -0.38
CSF1P09603 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 KRT8P35-201ENST00000483942 1338 ntBASIC12.66□□□□□ -0.38
CSF1P09603 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.66□□□□□ -0.38
CSF1P09603 U91328.1-201ENST00000437528 223 ntBASIC12.66□□□□□ -0.38
CSF1P09603 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.66□□□□□ -0.38
CSF1P09603 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC12.66□□□□□ -0.38
CSF1P09603 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.66□□□□□ -0.38
CSF1P09603 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.66□□□□□ -0.38
CSF1P09603 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.66□□□□□ -0.38
CSF1P09603 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CSF1P09603 AL079307.3-201ENST00000556114 283 ntBASIC12.66□□□□□ -0.38
CSF1P09603 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CSF1P09603 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 AL133215.2-201ENST00000609242 977 ntBASIC12.66□□□□□ -0.38
CSF1P09603 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CSF1P09603 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 AC019294.4-201ENST00000561777 2905 ntBASIC12.66□□□□□ -0.38
CSF1P09603 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CSF1P09603 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.66□□□□□ -0.38
CSF1P09603 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.66□□□□□ -0.38
CSF1P09603 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.65□□□□□ -0.38
CSF1P09603 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.65□□□□□ -0.38
CSF1P09603 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms