Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.34■□□□□ 0.37
CHGBP05060 NORAD-201ENST00000565493 5339 ntBASIC17.34■□□□□ 0.37
CHGBP05060 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 BRD7P5-201ENST00000299197 1822 ntBASIC17.34■□□□□ 0.37
CHGBP05060 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CHGBP05060 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CHGBP05060 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CHGBP05060 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.34■□□□□ 0.37
CHGBP05060 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 RPS9P1-201ENST00000419943 583 ntBASIC17.34■□□□□ 0.37
CHGBP05060 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.34■□□□□ 0.37
CHGBP05060 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.34■□□□□ 0.37
CHGBP05060 AC116345.2-201ENST00000512837 523 ntBASIC17.34■□□□□ 0.37
CHGBP05060 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.34■□□□□ 0.37
CHGBP05060 AL109837.1-201ENST00000603272 613 ntBASIC17.34■□□□□ 0.37
CHGBP05060 AL022334.2-201ENST00000610000 484 ntBASIC17.34■□□□□ 0.37
CHGBP05060 AC090386.2-201ENST00000623010 1039 ntBASIC17.34■□□□□ 0.37
CHGBP05060 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.34■□□□□ 0.37
CHGBP05060 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.34■□□□□ 0.37
CHGBP05060 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CHGBP05060 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CHGBP05060 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHGBP05060 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHGBP05060 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHGBP05060 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CHGBP05060 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CHGBP05060 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CHGBP05060 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHGBP05060 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.33■□□□□ 0.37
CHGBP05060 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CHGBP05060 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.33■□□□□ 0.37
CHGBP05060 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.33■□□□□ 0.37
CHGBP05060 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.33■□□□□ 0.37
CHGBP05060 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHGBP05060 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHGBP05060 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.33■□□□□ 0.37
CHGBP05060 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 AHCYP4-201ENST00000419201 1315 ntBASIC17.33■□□□□ 0.36
CHGBP05060 LINC00115-201ENST00000473798 1317 ntBASIC17.33■□□□□ 0.36
CHGBP05060 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CHGBP05060 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.33■□□□□ 0.36
CHGBP05060 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.33■□□□□ 0.36
CHGBP05060 TSPY25P-201ENST00000429463 745 ntBASIC17.33■□□□□ 0.36
CHGBP05060 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.33■□□□□ 0.36
CHGBP05060 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.33■□□□□ 0.36
CHGBP05060 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.33■□□□□ 0.36
CHGBP05060 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.33■□□□□ 0.36
CHGBP05060 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.33■□□□□ 0.36
CHGBP05060 AL133499.1-201ENST00000596207 608 ntBASIC17.33■□□□□ 0.36
CHGBP05060 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CHGBP05060 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.33■□□□□ 0.36
CHGBP05060 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17.33■□□□□ 0.36
CHGBP05060 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHGBP05060 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CHGBP05060 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHGBP05060 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.32■□□□□ 0.36
CHGBP05060 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CHGBP05060 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHGBP05060 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.32■□□□□ 0.36
CHGBP05060 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHGBP05060 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.32■□□□□ 0.36
CHGBP05060 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.32■□□□□ 0.36
CHGBP05060 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms