Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
IFNA1P01562 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
IFNA1P01562 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.55□□□□□ -0.56
IFNA1P01562 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
IFNA1P01562 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.55□□□□□ -0.56
IFNA1P01562 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.55□□□□□ -0.56
IFNA1P01562 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.55□□□□□ -0.56
IFNA1P01562 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
IFNA1P01562 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
IFNA1P01562 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
IFNA1P01562 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
IFNA1P01562 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
IFNA1P01562 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.55□□□□□ -0.56
IFNA1P01562 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
IFNA1P01562 AC010970.1-201ENST00000445125 1848 ntBASIC11.54□□□□□ -0.56
IFNA1P01562 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.54□□□□□ -0.56
IFNA1P01562 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
IFNA1P01562 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 SPDYE17-201ENST00000412399 783 ntBASIC11.54□□□□□ -0.56
IFNA1P01562 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 FAM86C2P-203ENST00000528684 1004 ntBASIC11.54□□□□□ -0.56
IFNA1P01562 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
IFNA1P01562 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 AC099522.2-201ENST00000607001 744 ntBASIC11.54□□□□□ -0.56
IFNA1P01562 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.54□□□□□ -0.56
IFNA1P01562 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC11.54□□□□□ -0.56
IFNA1P01562 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IFNA1P01562 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
IFNA1P01562 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.54□□□□□ -0.56
IFNA1P01562 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 FN1-206ENST00000359671 8524 ntTSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 AC015688.4-201ENST00000580780 1647 ntBASIC11.53□□□□□ -0.56
IFNA1P01562 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.53□□□□□ -0.56
IFNA1P01562 AL022323.5-201ENST00000624101 2059 ntBASIC11.53□□□□□ -0.56
IFNA1P01562 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.53□□□□□ -0.56
IFNA1P01562 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IFNA1P01562 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms