Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.43□□□□□ -0.58
ZNF253O75346 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
ZNF253O75346 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
ZNF253O75346 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.42□□□□□ -0.58
ZNF253O75346 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC11.42□□□□□ -0.58
ZNF253O75346 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 AC004967.1-201ENST00000453589 447 ntBASIC11.42□□□□□ -0.58
ZNF253O75346 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 RARRES2P5-201ENST00000564013 466 ntBASIC11.42□□□□□ -0.58
ZNF253O75346 DUX4L47-201ENST00000566374 394 ntBASIC11.42□□□□□ -0.58
ZNF253O75346 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.42□□□□□ -0.58
ZNF253O75346 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.42□□□□□ -0.58
ZNF253O75346 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.42□□□□□ -0.58
ZNF253O75346 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 MIR6074-201ENST00000612054 107 ntBASIC11.42□□□□□ -0.58
ZNF253O75346 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
ZNF253O75346 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.42□□□□□ -0.58
ZNF253O75346 AC100757.3-201ENST00000622361 1406 ntBASIC11.42□□□□□ -0.58
ZNF253O75346 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.42□□□□□ -0.58
ZNF253O75346 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
ZNF253O75346 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.41□□□□□ -0.58
ZNF253O75346 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
ZNF253O75346 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 TCAM1P-207ENST00000485295 1537 ntBASIC11.41□□□□□ -0.58
ZNF253O75346 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
ZNF253O75346 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms