Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CHMP2AO43633 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CHMP2AO43633 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CHMP2AO43633 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CHMP2AO43633 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.35■□□□□ 0.21
CHMP2AO43633 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
CHMP2AO43633 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CHMP2AO43633 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.34■□□□□ 0.21
CHMP2AO43633 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CHMP2AO43633 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP2AO43633 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 SBF1P1-201ENST00000444527 5631 ntBASIC16.34■□□□□ 0.21
CHMP2AO43633 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.34■□□□□ 0.21
CHMP2AO43633 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP2AO43633 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHMP2AO43633 AL157791.1-201ENST00000553667 1699 ntBASIC16.34■□□□□ 0.21
CHMP2AO43633 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHMP2AO43633 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP2AO43633 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CHMP2AO43633 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP2AO43633 RN7SL832P-201ENST00000607781 1756 ntBASIC16.33■□□□□ 0.21
CHMP2AO43633 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP2AO43633 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP2AO43633 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP2AO43633 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
CHMP2AO43633 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.33■□□□□ 0.21
CHMP2AO43633 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.33■□□□□ 0.21
CHMP2AO43633 AC117489.1-201ENST00000625169 3217 ntBASIC16.33■□□□□ 0.21
CHMP2AO43633 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP2AO43633 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP2AO43633 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP2AO43633 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHMP2AO43633 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP2AO43633 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CHMP2AO43633 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 RN7SKP214-201ENST00000364208 315 ntBASIC16.33■□□□□ 0.2
CHMP2AO43633 MIR769-201ENST00000390225 118 ntBASIC16.33■□□□□ 0.2
CHMP2AO43633 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 OR2R1P-201ENST00000441404 914 ntBASIC16.33■□□□□ 0.2
CHMP2AO43633 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP2AO43633 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHMP2AO43633 RN7SL774P-201ENST00000577467 290 ntBASIC16.33■□□□□ 0.2
CHMP2AO43633 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP2AO43633 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP2AO43633 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP2AO43633 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CHMP2AO43633 NAP1L6-202ENST00000641404 1222 ntBASIC16.33■□□□□ 0.2
CHMP2AO43633 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP2AO43633 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP2AO43633 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP2AO43633 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHMP2AO43633 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP2AO43633 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms