Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.78□□□□□ -0.04
RIPK2O43353 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.78□□□□□ -0.04
RIPK2O43353 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.78□□□□□ -0.04
RIPK2O43353 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.78□□□□□ -0.04
RIPK2O43353 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.78□□□□□ -0.04
RIPK2O43353 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.78□□□□□ -0.04
RIPK2O43353 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.78□□□□□ -0.04
RIPK2O43353 AL390754.1-201ENST00000619088 582 ntBASIC14.78□□□□□ -0.04
RIPK2O43353 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 AC125807.2-201ENST00000513358 3514 ntBASIC14.78□□□□□ -0.04
RIPK2O43353 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RIPK2O43353 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.78□□□□□ -0.04
RIPK2O43353 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
RIPK2O43353 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.78□□□□□ -0.04
RIPK2O43353 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RIPK2O43353 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC14.78□□□□□ -0.04
RIPK2O43353 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.78□□□□□ -0.04
RIPK2O43353 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RIPK2O43353 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIPK2O43353 AL359845.1-201ENST00000458202 1648 ntBASIC14.77□□□□□ -0.04
RIPK2O43353 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.77□□□□□ -0.04
RIPK2O43353 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RIPK2O43353 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIPK2O43353 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIPK2O43353 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RIPK2O43353 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIPK2O43353 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIPK2O43353 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RIPK2O43353 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.77□□□□□ -0.05
RIPK2O43353 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
RIPK2O43353 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.77□□□□□ -0.05
RIPK2O43353 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.77□□□□□ -0.05
RIPK2O43353 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.77□□□□□ -0.05
RIPK2O43353 AC104596.2-201ENST00000512793 793 ntBASIC14.77□□□□□ -0.05
RIPK2O43353 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
RIPK2O43353 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.77□□□□□ -0.05
RIPK2O43353 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.77□□□□□ -0.05
RIPK2O43353 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.77□□□□□ -0.05
RIPK2O43353 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.77□□□□□ -0.05
RIPK2O43353 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RIPK2O43353 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.77□□□□□ -0.05
RIPK2O43353 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RIPK2O43353 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.77□□□□□ -0.05
RIPK2O43353 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.77□□□□□ -0.05
RIPK2O43353 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.77□□□□□ -0.05
RIPK2O43353 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.76□□□□□ -0.05
RIPK2O43353 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.76□□□□□ -0.05
RIPK2O43353 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RIPK2O43353 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms