Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.44■□□□□ 0.06
CAPN9O14815 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CAPN9O14815 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CAPN9O14815 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CAPN9O14815 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CAPN9O14815 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CAPN9O14815 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CAPN9O14815 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.43■□□□□ 0.06
CAPN9O14815 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CAPN9O14815 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.43■□□□□ 0.06
CAPN9O14815 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.43■□□□□ 0.06
CAPN9O14815 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CAPN9O14815 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 CICP12-201ENST00000455801 843 ntBASIC15.43■□□□□ 0.06
CAPN9O14815 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.43■□□□□ 0.06
CAPN9O14815 RPSAP36-202ENST00000494591 1261 ntBASIC15.43■□□□□ 0.06
CAPN9O14815 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CAPN9O14815 FAM86HP-204ENST00000513466 959 ntBASIC15.43■□□□□ 0.06
CAPN9O14815 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CAPN9O14815 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 DUX4L46-201ENST00000566845 751 ntBASIC15.43■□□□□ 0.06
CAPN9O14815 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.43■□□□□ 0.06
CAPN9O14815 AC091271.1-201ENST00000611877 1162 ntBASIC15.43■□□□□ 0.06
CAPN9O14815 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.43■□□□□ 0.06
CAPN9O14815 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN9O14815 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.43■□□□□ 0.06
CAPN9O14815 AC139712.1-201ENST00000378256 1875 ntBASIC15.43■□□□□ 0.06
CAPN9O14815 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.43■□□□□ 0.06
CAPN9O14815 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
CAPN9O14815 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN9O14815 E2F3P2-201ENST00000447755 1422 ntBASIC15.43■□□□□ 0.06
CAPN9O14815 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CAPN9O14815 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN9O14815 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN9O14815 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN9O14815 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CAPN9O14815 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
CAPN9O14815 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN9O14815 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CAPN9O14815 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.42■□□□□ 0.06
CAPN9O14815 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.42■□□□□ 0.06
CAPN9O14815 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN9O14815 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN9O14815 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN9O14815 AC103988.2-201ENST00000561804 725 ntBASIC15.42■□□□□ 0.06
CAPN9O14815 AC100827.2-201ENST00000563214 1194 ntBASIC15.42■□□□□ 0.06
CAPN9O14815 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.42■□□□□ 0.06
CAPN9O14815 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN9O14815 AC103810.3-201ENST00000583567 96 ntBASIC15.42■□□□□ 0.06
CAPN9O14815 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.42■□□□□ 0.06
CAPN9O14815 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN9O14815 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN9O14815 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN9O14815 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms