Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC245884.6-201ENST00000515672 1067 ntBASIC15.27■□□□□ 0.04
CLDN5O00501 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN5O00501 AL161670.2-201ENST00000557650 1227 ntBASIC15.27■□□□□ 0.04
CLDN5O00501 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN5O00501 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN5O00501 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN5O00501 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN5O00501 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN5O00501 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDN5O00501 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CLDN5O00501 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDN5O00501 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLDN5O00501 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDN5O00501 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CLDN5O00501 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 AC007191.1-201ENST00000623179 2995 ntBASIC15.27■□□□□ 0.03
CLDN5O00501 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDN5O00501 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN5O00501 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN5O00501 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.26■□□□□ 0.03
CLDN5O00501 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN5O00501 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN5O00501 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN5O00501 RNA5SP359-201ENST00000364838 113 ntBASIC15.26■□□□□ 0.03
CLDN5O00501 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.26■□□□□ 0.03
CLDN5O00501 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN5O00501 AL133466.1-201ENST00000447582 150 ntBASIC15.26■□□□□ 0.03
CLDN5O00501 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN5O00501 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN5O00501 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.26■□□□□ 0.03
CLDN5O00501 FGFR3P5-201ENST00000564496 886 ntBASIC15.26■□□□□ 0.03
CLDN5O00501 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.26■□□□□ 0.03
CLDN5O00501 AC020922.3-201ENST00000595064 547 ntBASIC15.26■□□□□ 0.03
CLDN5O00501 AC091812.3-201ENST00000621362 345 ntBASIC15.26■□□□□ 0.03
CLDN5O00501 AL591471.1-201ENST00000621855 229 ntBASIC15.26■□□□□ 0.03
CLDN5O00501 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLDN5O00501 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CLDN5O00501 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.26■□□□□ 0.03
CLDN5O00501 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CLDN5O00501 CICP16-201ENST00000502609 2813 ntBASIC15.25■□□□□ 0.03
CLDN5O00501 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CLDN5O00501 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 FRMPD2B-201ENST00000431305 1347 ntBASIC15.25■□□□□ 0.03
CLDN5O00501 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.25■□□□□ 0.03
CLDN5O00501 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN5O00501 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CLDN5O00501 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.25■□□□□ 0.03
CLDN5O00501 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms