Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC7.99□□□□□ -1.13
CHKB-CPT1BH3BT56 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CHKB-CPT1BH3BT56 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CHKB-CPT1BH3BT56 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CHKB-CPT1BH3BT56 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHKB-CPT1BH3BT56 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHKB-CPT1BH3BT56 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC7.99□□□□□ -1.13
CHKB-CPT1BH3BT56 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CHKB-CPT1BH3BT56 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 TCAM1P-207ENST00000485295 1537 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ZSCAN2-207ENST00000448803 3813 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AL445647.1-201ENST00000606221 3599 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AC078846.1-201ENST00000608694 7083 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 LHX4-201ENST00000263726 5820 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 PMS2P1-201ENST00000431037 1228 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 TADA2B-205ENST00000515646 3818 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 COPE-211ENST00000600932 1144 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AC010331.1-201ENST00000611423 582 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 WT1-AS_2.1-201ENST00000613208 137 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 LACC1-203ENST00000441843 4262 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 METTL22-202ENST00000381920 4984 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 NT5C3AP1-202ENST00000441170 1663 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AL590787.1-201ENST00000568856 1315 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AC020763.3-201ENST00000625095 2904 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 SLC12A6-202ENST00000354181 4568 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AL354861.3-201ENST00000600140 2412 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 AC009093.2-202ENST00000620513 2079 ntBASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 TCOF1-211ENST00000513346 4646 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CHKB-CPT1BH3BT56 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC7.97□□□□□ -1.13
CHKB-CPT1BH3BT56 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms