Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 PUDPP3-201ENST00000445368 636 ntBASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AC012618.1-201ENST00000461223 412 ntBASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 FGFR3P5-201ENST00000564496 886 ntBASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AC005962.1-201ENST00000584100 773 ntBASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPA2E9PIF3 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 FAM45BP-202ENST00000592932 1624 ntBASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 CICP12-201ENST00000455801 843 ntBASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 NUP210P1-202ENST00000504322 710 ntBASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 AC024681.1-201ENST00000521917 487 ntBASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 SNORD3B-2-202ENST00000571722 791 ntBASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 AC016629.1-201ENST00000596579 586 ntBASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 MIR6720-201ENST00000611664 98 ntBASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 MRPL37P1-201ENST00000592451 1337 ntBASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms