Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.85□□□□□ -0.51
LINC00473A8K010 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC00473A8K010 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
LINC00473A8K010 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
LINC00473A8K010 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00473A8K010 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC00473A8K010 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC00473A8K010 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 AL137784.3-201ENST00000623858 2288 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00473A8K010 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 CD8B2-202ENST00000417670 633 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC11.84□□□□□ -0.51
LINC00473A8K010 FTH1P14-201ENST00000482930 551 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00473A8K010 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00473A8K010 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.84□□□□□ -0.51
LINC00473A8K010 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 AC078819.1-201ENST00000547454 765 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 AC012085.1-201ENST00000548270 765 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00473A8K010 RN7SL713P-201ENST00000582127 302 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 AC015936.2-201ENST00000593177 259 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.84□□□□□ -0.51
LINC00473A8K010 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 AL358472.3-201ENST00000608147 415 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 AC027601.3-201ENST00000622907 509 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC00473A8K010 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
LINC00473A8K010 AL354989.2-201ENST00000435838 1540 ntBASIC11.84□□□□□ -0.51
LINC00473A8K010 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC00473A8K010 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
LINC00473A8K010 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC00473A8K010 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
LINC00473A8K010 AC126335.2-201ENST00000623362 4637 ntBASIC11.83□□□□□ -0.51
LINC00473A8K010 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.51
LINC00473A8K010 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LINC00473A8K010 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 AC073548.1-201ENST00000624088 1882 ntBASIC11.83□□□□□ -0.52
LINC00473A8K010 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC00473A8K010 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00473A8K010 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms