Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 NCLP1-201ENST00000445357 1963 ntBASIC12.49□□□□□ -0.41
TMEM235A6NFC5 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM235A6NFC5 AC139712.1-201ENST00000378256 1875 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 KLF2P2-201ENST00000416807 1039 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 BX842568.4-201ENST00000421222 227 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC009477.1-201ENST00000452936 217 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 GIMAP3P-201ENST00000495150 836 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 GCOM2-201ENST00000509133 1104 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC097493.3-201ENST00000509725 367 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC135586.1-201ENST00000539323 574 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SNHG9-202ENST00000564014 471 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 KHSRPP1-201ENST00000427983 1768 ntBASIC12.48□□□□□ -0.41
TMEM235A6NFC5 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
TMEM235A6NFC5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 LRRC59-203ENST00000576448 1531 ntBASIC12.47□□□□□ -0.41
TMEM235A6NFC5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 INTS4P2-202ENST00000614726 2019 ntBASIC12.47□□□□□ -0.41
TMEM235A6NFC5 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 AL138725.1-201ENST00000407347 1314 ntBASIC12.47□□□□□ -0.41
TMEM235A6NFC5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 TREML5P-201ENST00000421694 576 ntBASIC12.47□□□□□ -0.41
TMEM235A6NFC5 TSEN15P1-201ENST00000423257 515 ntBASIC12.47□□□□□ -0.41
TMEM235A6NFC5 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 AC114812.1-204ENST00000449669 728 ntBASIC12.47□□□□□ -0.41
TMEM235A6NFC5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.47□□□□□ -0.41
TMEM235A6NFC5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms