Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 MIR5572-201ENST00000583188 137 ntBASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 MIR7845-201ENST00000618396 99 ntBASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 AL805961.1-201ENST00000642026 753 ntBASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TBC1D3FA6NER0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AC092053.3-201ENST00000641308 4975 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AL807761.2-201ENST00000422849 729 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 DUTP3-201ENST00000450025 415 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AC093752.3-201ENST00000567343 901 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AC007326.1-201ENST00000604539 458 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 U62317.3-201ENST00000608319 855 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AC021016.3-201ENST00000608367 477 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AL022334.2-201ENST00000610000 484 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 COX6A1P2-201ENST00000620597 330 ntBASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TBC1D3FA6NER0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms