Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 FKBP4P8-201ENST00000610931 1369 ntBASIC19.4■□□□□ 0.7
PHF8Q9UPP1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 RPL13AP3-202ENST00000494676 1473 ntBASIC19.4■□□□□ 0.7
PHF8Q9UPP1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 TBC1D27-202ENST00000424239 1573 ntBASIC19.4■□□□□ 0.7
PHF8Q9UPP1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PHF8Q9UPP1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PHF8Q9UPP1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
PHF8Q9UPP1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PHF8Q9UPP1 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.39■□□□□ 0.7
PHF8Q9UPP1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PHF8Q9UPP1 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 PIFO-201ENST00000369737 746 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AC073210.1-201ENST00000414799 232 ntBASIC19.39■□□□□ 0.69
PHF8Q9UPP1 FAM21EP-201ENST00000417804 985 ntBASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AL136982.5-201ENST00000605222 294 ntBASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AC117503.4-201ENST00000623229 1418 ntBASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AC007952.5-201ENST00000572818 1486 ntBASIC19.39■□□□□ 0.69
PHF8Q9UPP1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AC232323.1-201ENST00000540724 2099 ntBASIC19.39■□□□□ 0.69
PHF8Q9UPP1 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.39■□□□□ 0.69
PHF8Q9UPP1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 AP000244.1-201ENST00000424582 201 ntBASIC19.38■□□□□ 0.69
PHF8Q9UPP1 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 AC093300.1-201ENST00000510368 1201 ntBASIC19.38■□□□□ 0.69
PHF8Q9UPP1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 AL512310.5-201ENST00000551999 515 ntBASIC19.38■□□□□ 0.69
PHF8Q9UPP1 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 AC010326.4-201ENST00000604665 891 ntBASIC19.38■□□□□ 0.69
PHF8Q9UPP1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PHF8Q9UPP1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PHF8Q9UPP1 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms