Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 AC010234.1-201ENST00000494599 870 ntBASIC16.66■□□□□ 0.26
PNMA3Q9UL41 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 AL022344.2-201ENST00000568976 968 ntBASIC16.66■□□□□ 0.26
PNMA3Q9UL41 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 AC007250.1-201ENST00000608934 338 ntBASIC16.66■□□□□ 0.26
PNMA3Q9UL41 OR13I1P-201ENST00000609811 1264 ntBASIC16.66■□□□□ 0.26
PNMA3Q9UL41 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 AC015688.4-201ENST00000580780 1647 ntBASIC16.66■□□□□ 0.26
PNMA3Q9UL41 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 CICP23-201ENST00000605013 2741 ntBASIC16.66■□□□□ 0.26
PNMA3Q9UL41 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PNMA3Q9UL41 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 AC006372.4-201ENST00000624122 1543 ntBASIC16.65■□□□□ 0.26
PNMA3Q9UL41 AC067930.6-201ENST00000623257 4947 ntBASIC16.65■□□□□ 0.26
PNMA3Q9UL41 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.65■□□□□ 0.26
PNMA3Q9UL41 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.65■□□□□ 0.26
PNMA3Q9UL41 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 RPL35P9-201ENST00000446059 350 ntBASIC16.64■□□□□ 0.25
PNMA3Q9UL41 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.64■□□□□ 0.25
PNMA3Q9UL41 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms