Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBQLN2Q9UHD9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 CNN2P11-201ENST00000429351 262 ntBASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 KRT18P34-201ENST00000488218 1270 ntBASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 IGHV3-62-201ENST00000520057 340 ntBASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 POM121L4P-202ENST00000427789 1891 ntBASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.37□□□□□ -0.43
UBQLN2Q9UHD9 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.36□□□□□ -0.43
UBQLN2Q9UHD9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms