Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AC011474.4-201ENST00000623523 2076 ntBASIC13.67□□□□□ -0.22
CNIH4Q9P003 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 FAM86MP-201ENST00000340703 885 ntBASIC13.67□□□□□ -0.22
CNIH4Q9P003 MIR326-201ENST00000362220 95 ntBASIC13.67□□□□□ -0.22
CNIH4Q9P003 RN7SKP230-201ENST00000365642 335 ntBASIC13.67□□□□□ -0.22
CNIH4Q9P003 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AC008825.2-201ENST00000603374 718 ntBASIC13.67□□□□□ -0.22
CNIH4Q9P003 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.66□□□□□ -0.22
CNIH4Q9P003 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 RPSAP36-202ENST00000494591 1261 ntBASIC13.66□□□□□ -0.22
CNIH4Q9P003 ALG3P1-201ENST00000508806 1114 ntBASIC13.66□□□□□ -0.22
CNIH4Q9P003 FAM8A2P-201ENST00000528813 1142 ntBASIC13.66□□□□□ -0.22
CNIH4Q9P003 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.66□□□□□ -0.22
CNIH4Q9P003 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CNIH4Q9P003 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms