Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AL137784.3-201ENST00000623858 2288 ntBASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.18□□□□□ -0.46
LIN7CQ9NUP9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 MRPL37P1-201ENST00000592451 1337 ntBASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 AC022137.2-201ENST00000503482 481 ntBASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 AC026434.2-201ENST00000506094 1078 ntBASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 TDH-203ENST00000531764 1110 ntBASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 MIR5189-201ENST00000577370 114 ntBASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 CLUHP6-201ENST00000580789 941 ntBASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.17□□□□□ -0.46
LIN7CQ9NUP9 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 LRRC59-203ENST00000576448 1531 ntBASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC063926.2-201ENST00000623766 1308 ntBASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms