Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 AC023908.3-201ENST00000564211 3047 ntBASIC12.5□□□□□ -0.41
GCM1Q9NP62 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.5□□□□□ -0.41
GCM1Q9NP62 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 MIR1908-201ENST00000410394 80 ntBASIC12.5□□□□□ -0.41
GCM1Q9NP62 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
GCM1Q9NP62 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
GCM1Q9NP62 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 HSPB1P2-201ENST00000448722 546 ntBASIC12.49□□□□□ -0.41
GCM1Q9NP62 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 DUX4L46-201ENST00000566845 751 ntBASIC12.49□□□□□ -0.41
GCM1Q9NP62 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 AC091271.1-201ENST00000611877 1162 ntBASIC12.49□□□□□ -0.41
GCM1Q9NP62 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
GCM1Q9NP62 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
GCM1Q9NP62 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms