Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNA5SP491-201ENST00000362936 118 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AC092284.1-201ENST00000511386 1289 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 ELOBP2-201ENST00000526184 355 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 BCAR1P1-201ENST00000553953 636 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 NEMF-210ENST00000556672 590 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 AC091905.3-201ENST00000624959 234 ntBASIC13.13□□□□□ -0.31
CHD8Q9HCK8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CHD8Q9HCK8 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AC124944.3-201ENST00000607976 1304 ntBASIC13.12□□□□□ -0.31
CHD8Q9HCK8 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC13.12□□□□□ -0.31
CHD8Q9HCK8 RPL3P2-204ENST00000413027 1203 ntBASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 PRDX2P3-201ENST00000515779 586 ntBASIC13.12□□□□□ -0.31
CHD8Q9HCK8 GOLGA2P10-201ENST00000550961 817 ntBASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 IL6RP1-201ENST00000417848 1273 ntBASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AC233724.9-201ENST00000511694 407 ntBASIC13.12□□□□□ -0.31
CHD8Q9HCK8 FOS-205ENST00000555242 629 ntTSL 2 BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AC009132.1-201ENST00000565194 320 ntBASIC13.12□□□□□ -0.31
CHD8Q9HCK8 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CHD8Q9HCK8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 TUBB2BP1-201ENST00000404155 871 ntBASIC13.11□□□□□ -0.31
CHD8Q9HCK8 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 RN7SL794P-201ENST00000469816 280 ntBASIC13.11□□□□□ -0.31
CHD8Q9HCK8 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 RN7SL455P-201ENST00000580629 282 ntBASIC13.11□□□□□ -0.31
CHD8Q9HCK8 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 AC005332.8-201ENST00000622750 2735 ntBASIC13.11□□□□□ -0.31
CHD8Q9HCK8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 SFPQP1-201ENST00000446621 1786 ntBASIC13.11□□□□□ -0.31
CHD8Q9HCK8 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 AL136298.3-201ENST00000556746 445 ntBASIC13.11□□□□□ -0.31
CHD8Q9HCK8 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CHD8Q9HCK8 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHD8Q9HCK8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHD8Q9HCK8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.1□□□□□ -0.31
CHD8Q9HCK8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CHD8Q9HCK8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms