Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AP001063.1-201ENST00000568332 529 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 TMEM261P1-201ENST00000604899 340 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 CU634019.7-201ENST00000624153 1185 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 FP236241.2-201ENST00000624906 1185 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 AL590440.2-201ENST00000641973 1595 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 AC027612.1-201ENST00000445234 2395 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 FKBP4P6-201ENST00000457486 1332 ntBASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
HDHD3Q9BSH5 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HDHD3Q9BSH5 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
HDHD3Q9BSH5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.43
HDHD3Q9BSH5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HDHD3Q9BSH5 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 ACKR1-201ENST00000368121 1240 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 POM121L8P-201ENST00000417732 1281 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC245100.3-201ENST00000441281 285 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 POM121L9P-203ENST00000441984 1285 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 MESTP3-201ENST00000503460 968 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC022137.2-201ENST00000503482 481 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 CTBP2P3-201ENST00000585629 1255 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC138466.3-201ENST00000619983 221 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC004899.2-201ENST00000622993 3860 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 TUBB8P4-201ENST00000511806 1324 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 AC005014.1-201ENST00000432006 2976 ntBASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HDHD3Q9BSH5 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HDHD3Q9BSH5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms