Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 AL109837.1-201ENST00000603272 613 ntBASIC16.9■□□□□ 0.3
SLF1Q9BQI6 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLF1Q9BQI6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SLF1Q9BQI6 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SLF1Q9BQI6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLF1Q9BQI6 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SLF1Q9BQI6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 AC006504.5-208ENST00000588784 2401 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 TSPY25P-201ENST00000429463 745 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 AC019193.1-201ENST00000506678 823 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 MIR4722-201ENST00000578292 60 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 MIR3188-201ENST00000583494 85 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 CICP4-201ENST00000447359 2812 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 KHSRPP1-201ENST00000427983 1768 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 INTS4P1-203ENST00000641008 3683 ntBASIC16.89■□□□□ 0.29
SLF1Q9BQI6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLF1Q9BQI6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 OR2K2-202ENST00000374428 1038 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 OR2R1P-201ENST00000441404 914 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 RPS2P36-201ENST00000456516 831 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AC026803.1-201ENST00000569130 274 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 MIR6769A-201ENST00000617340 73 ntBASIC16.88■□□□□ 0.29
SLF1Q9BQI6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLF1Q9BQI6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms