Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 ANKRD19P-201ENST00000338192 862 ntBASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 ACKR1-201ENST00000368121 1240 ntBASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 AC119751.2-201ENST00000504529 210 ntBASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 AC106760.1-201ENST00000508690 800 ntBASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 AC104989.1-201ENST00000519711 778 ntBASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 MIR4259-201ENST00000584466 101 ntBASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 PDIA3P1-201ENST00000471856 1510 ntBASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TUBA1CQ9BQE3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AC092933.1-201ENST00000393644 945 ntBASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AC022137.2-201ENST00000503482 481 ntBASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AP005482.1-201ENST00000563722 1273 ntBASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AC133552.6-201ENST00000613406 534 ntBASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 BX539320.1-201ENST00000623759 877 ntBASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 COX11-210ENST00000639671 696 ntBASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 AL645728.2-202ENST00000641679 227 ntBASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1CQ9BQE3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms