Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 FKBP4P6-201ENST00000457486 1332 ntBASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 TUBB8P4-201ENST00000511806 1324 ntBASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHAMP1Q96JM3 KRT8P28-201ENST00000433288 1390 ntBASIC16.89■□□□□ 0.3
CHAMP1Q96JM3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.89■□□□□ 0.3
CHAMP1Q96JM3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CHAMP1Q96JM3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHAMP1Q96JM3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CHAMP1Q96JM3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC16.89■□□□□ 0.3
CHAMP1Q96JM3 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHAMP1Q96JM3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHAMP1Q96JM3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 MEP1AP4-201ENST00000423244 1087 ntBASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 NME2P1-201ENST00000426182 414 ntBASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 AC133539.2-201ENST00000604757 467 ntBASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 AC145423.3-201ENST00000615987 467 ntBASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 AC004899.2-201ENST00000622993 3860 ntBASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CHAMP1Q96JM3 AC102953.2-201ENST00000609755 3026 ntBASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 IGHV3-71-201ENST00000523324 359 ntBASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 API5-211ENST00000534695 560 ntTSL 5 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 TMEM261P1-201ENST00000604899 340 ntBASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 PCDHB18P-202ENST00000526308 3197 ntBASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.88■□□□□ 0.29
CHAMP1Q96JM3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms