Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 AC026320.2-201ENST00000434379 478 ntBASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AC005740.1-201ENST00000515639 522 ntBASIC12.97□□□□□ -0.33
RNF138Q8WVD3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 MIR3677-201ENST00000578964 60 ntBASIC12.97□□□□□ -0.33
RNF138Q8WVD3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 RCC2P1-201ENST00000452257 1476 ntBASIC12.97□□□□□ -0.33
RNF138Q8WVD3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RNF138Q8WVD3 AC011474.4-201ENST00000623523 2076 ntBASIC12.97□□□□□ -0.33
RNF138Q8WVD3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 FAM90A2P-201ENST00000511144 1395 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 FAM90A25P-201ENST00000528404 1395 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 OR2K2-202ENST00000374428 1038 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 MIR645-201ENST00000385283 94 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 SLC25A24P2-201ENST00000415059 510 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 AK2P2-201ENST00000439142 405 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 DUTP3-201ENST00000450025 415 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 RTN3P1-201ENST00000536295 711 ntBASIC12.96□□□□□ -0.33
RNF138Q8WVD3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.96□□□□□ -0.33
RNF138Q8WVD3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 AL157996.1-201ENST00000624684 2299 ntBASIC12.96□□□□□ -0.34
RNF138Q8WVD3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RNF138Q8WVD3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 KRT18P9-201ENST00000604826 1300 ntBASIC12.95□□□□□ -0.34
RNF138Q8WVD3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RNF138Q8WVD3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms