Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCDC107Q8WV48 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 AL139385.1-201ENST00000611744 3272 ntBASIC12.68□□□□□ -0.38
CCDC107Q8WV48 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 FAM90A12P-201ENST00000519497 2375 ntBASIC12.68□□□□□ -0.38
CCDC107Q8WV48 FAM90A24P-201ENST00000520792 2369 ntBASIC12.68□□□□□ -0.38
CCDC107Q8WV48 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 MRPS18AP1-201ENST00000414458 589 ntBASIC12.68□□□□□ -0.38
CCDC107Q8WV48 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.68□□□□□ -0.38
CCDC107Q8WV48 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCDC107Q8WV48 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 MIR497HG-202ENST00000572453 3838 ntBASIC12.67□□□□□ -0.38
CCDC107Q8WV48 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 GAPDHP40-201ENST00000505218 1006 ntBASIC12.67□□□□□ -0.38
CCDC107Q8WV48 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 AC005498.2-205ENST00000593218 784 ntBASIC12.67□□□□□ -0.38
CCDC107Q8WV48 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCDC107Q8WV48 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms