Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 MIR6720-201ENST00000611664 98 ntBASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SHROOM3Q8TF72 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.77□□□□□ -0.05
SHROOM3Q8TF72 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AC021016.3-201ENST00000608367 477 ntBASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SHROOM3Q8TF72 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 FLJ16779-201ENST00000612722 7638 ntBASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 AC007663.3-201ENST00000609632 465 ntBASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 AL022334.2-201ENST00000610000 484 ntBASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 AC090386.2-201ENST00000623010 1039 ntBASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SHROOM3Q8TF72 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms