Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLHC1Q8NHS4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 AL157996.1-201ENST00000624684 2299 ntBASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 TPM3P8-201ENST00000330554 643 ntBASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 RN7SL48P-201ENST00000579283 293 ntBASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CLHC1Q8NHS4 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 CICP17-201ENST00000418553 2377 ntBASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 AL590440.2-201ENST00000641973 1595 ntBASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLHC1Q8NHS4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 RN7SKP175-201ENST00000408472 289 ntBASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 AP006294.1-201ENST00000415407 339 ntBASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 CRB3P1-201ENST00000449338 276 ntBASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 SORD2P-201ENST00000558556 1069 ntBASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 AL355385.1-201ENST00000606123 409 ntBASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CLHC1Q8NHS4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms