Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 OR52M2P-201ENST00000414298 959 ntBASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 RN7SL556P-201ENST00000582856 298 ntBASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 GAS7-216ENST00000583882 553 ntTSL 5 BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CFAP43Q8NDM7 AL365181.1-201ENST00000564032 1828 ntBASIC22.02■■□□□ 1.11
CFAP43Q8NDM7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
CFAP43Q8NDM7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
CFAP43Q8NDM7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CFAP43Q8NDM7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 ODCP-201ENST00000459650 1639 ntBASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 NQO2-204ENST00000380454 851 ntTSL 2 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 MED11-202ENST00000573708 802 ntTSL 2 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 AL031673.1-201ENST00000611460 466 ntBASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 AC110057.1-201ENST00000636031 898 ntBASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CFAP43Q8NDM7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 AC007952.5-201ENST00000572818 1486 ntBASIC22■■□□□ 1.11
CFAP43Q8NDM7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 AC136604.1-202ENST00000425471 771 ntBASIC22■■□□□ 1.11
CFAP43Q8NDM7 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 AL591424.3-201ENST00000614278 872 ntBASIC22■■□□□ 1.11
CFAP43Q8NDM7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 AIRN-201ENST00000601203 4374 ntBASIC22■■□□□ 1.11
CFAP43Q8NDM7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC22■■□□□ 1.11
CFAP43Q8NDM7 FAM45BP-202ENST00000592932 1624 ntBASIC22■■□□□ 1.11
CFAP43Q8NDM7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CFAP43Q8NDM7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC21.99■■□□□ 1.11
CFAP43Q8NDM7 AC138761.6-201ENST00000583997 1423 ntBASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms