Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 CALR4P-201ENST00000431943 946 ntBASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 NKAIN1P1-201ENST00000435754 582 ntBASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 BNIP3P13-201ENST00000599968 566 ntBASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 AC007191.1-201ENST00000623179 2995 ntBASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM48Q8IWZ4 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 AC011742.3-201ENST00000439053 820 ntBASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 NDUFV2P1-201ENST00000596415 907 ntBASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 AC091544.8-201ENST00000619490 361 ntBASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 AC018442.1-201ENST00000421439 2061 ntBASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TRIM48Q8IWZ4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 AC013726.1-201ENST00000563747 2285 ntBASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRIM48Q8IWZ4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms