Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC027237.1-201ENST00000560942 655 ntBASIC16.19■□□□□ 0.18
TRIM50Q86XT4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AC073352.2-201ENST00000609385 439 ntBASIC16.19■□□□□ 0.18
TRIM50Q86XT4 AL022334.2-201ENST00000610000 484 ntBASIC16.19■□□□□ 0.18
TRIM50Q86XT4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM50Q86XT4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AP002353.1-201ENST00000528257 1599 ntBASIC16.18■□□□□ 0.18
TRIM50Q86XT4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 FGD5P1-202ENST00000614866 2498 ntBASIC16.18■□□□□ 0.18
TRIM50Q86XT4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AC026316.1-201ENST00000398900 414 ntBASIC16.18■□□□□ 0.18
TRIM50Q86XT4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 RN7SL277P-201ENST00000481521 288 ntBASIC16.18■□□□□ 0.18
TRIM50Q86XT4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM50Q86XT4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.17■□□□□ 0.18
TRIM50Q86XT4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM50Q86XT4 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms