Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AC009947.1-201ENST00000444350 727 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 AC018712.1-201ENST00000455767 687 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 AF186996.4-201ENST00000467186 377 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AL049597.2-201ENST00000565575 961 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 AC018845.2-201ENST00000568326 409 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 MIR6074-201ENST00000612054 107 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AL022323.5-201ENST00000624101 2059 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AL845472.1-202ENST00000624675 4080 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 PCDHB19P-202ENST00000625133 2914 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 DNMT3B-203ENST00000348286 4048 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AP3S2-216ENST00000617003 1561 ntBASIC11.03□□□□□ -0.64
MRPL54Q6P161 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.03□□□□□ -0.64
MRPL54Q6P161 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
MRPL54Q6P161 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.02□□□□□ -0.64
MRPL54Q6P161 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.02□□□□□ -0.64
MRPL54Q6P161 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.02□□□□□ -0.64
MRPL54Q6P161 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.02□□□□□ -0.64
MRPL54Q6P161 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 POM121L4P-202ENST00000427789 1891 ntBASIC11.02□□□□□ -0.64
MRPL54Q6P161 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
MRPL54Q6P161 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC11.02□□□□□ -0.64
MRPL54Q6P161 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
MRPL54Q6P161 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC11.02□□□□□ -0.64
MRPL54Q6P161 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
MRPL54Q6P161 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms