Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 AC092903.1-201ENST00000466506 262 ntBASIC17.9■□□□□ 0.46
RC3H1Q5TC82 AC018846.1-201ENST00000568231 183 ntBASIC17.9■□□□□ 0.46
RC3H1Q5TC82 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 RARS-210ENST00000626454 177 ntTSL 5 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 AC232323.1-201ENST00000540724 2099 ntBASIC17.9■□□□□ 0.46
RC3H1Q5TC82 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RC3H1Q5TC82 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RC3H1Q5TC82 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.89■□□□□ 0.46
RC3H1Q5TC82 AC022532.1-201ENST00000624563 1728 ntBASIC17.89■□□□□ 0.46
RC3H1Q5TC82 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
RC3H1Q5TC82 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RC3H1Q5TC82 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RC3H1Q5TC82 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 AC006486.2-201ENST00000624246 2199 ntBASIC17.89■□□□□ 0.45
RC3H1Q5TC82 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 AC022080.1-201ENST00000366255 781 ntBASIC17.89■□□□□ 0.45
RC3H1Q5TC82 UROS-201ENST00000368774 744 ntTSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 ACTBP14-201ENST00000411655 1089 ntBASIC17.89■□□□□ 0.45
RC3H1Q5TC82 SERBP1P2-201ENST00000436888 1164 ntBASIC17.89■□□□□ 0.45
RC3H1Q5TC82 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 BAK1P2-201ENST00000532665 631 ntBASIC17.89■□□□□ 0.45
RC3H1Q5TC82 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 AL049840.2-201ENST00000602722 535 ntBASIC17.89■□□□□ 0.45
RC3H1Q5TC82 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 ESR1-214ENST00000638569 132 ntTSL 5 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.89■□□□□ 0.45
RC3H1Q5TC82 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 AJ011931.1-201ENST00000618749 2492 ntBASIC17.88■□□□□ 0.45
RC3H1Q5TC82 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 NRADDP-201ENST00000437305 691 ntBASIC17.88■□□□□ 0.45
RC3H1Q5TC82 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 SEPHS2P1-201ENST00000511618 1162 ntBASIC17.88■□□□□ 0.45
RC3H1Q5TC82 COQ10BP2-201ENST00000513804 724 ntBASIC17.88■□□□□ 0.45
RC3H1Q5TC82 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC17.88■□□□□ 0.45
RC3H1Q5TC82 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms